You are looking at two different things.
First thing is the DNS servers used by the router. Routers are doing DHCP to get an IP address from the ISP. In the DHCP answer the ISP tells the router which IP address to use and also which DNS Servers use. Some routers offer a web interface where you can override the DNS servers and enter the ones you want to use.
Second thing is dynamic DNS. A router with DynDNS is registering at the DynDNS provider each time he gets a new IP address. This registration can for example be as simple as opening a web page like "http://dyndns-provider.com/register-new-address?dnsname=...&name=...&password=...". Upon registration the DynDNS provider will update the SRV entry in its DNS server so that clients requesting the IP address for your DynDNS name will get the new IP address.
Registering at the DynDNS provider is not related to the router's DNS entries, it has no effect on them. So what you want to achieve is not possible this way.