Questions tagged [microscopy]

The technique of using microscopes to view objects that are otherwise too small to be easily seen by the naked eye.

What questions should have this tag?

  1. Questions related to principles of microscopy (not extending too much in the field of optics)
  2. Sample preparation for microscopy
  3. Technical queries regarding instrument settings
  4. Analysis of microscopic image data

Some basic definitions

  1. Magnification: Ratio of the size of the image and the actual size of the object
  2. Focus: Actual or imaginary point of convergence of the rays refracted through the lens
  3. Numerical Aperture: The ability of an optical system to gather light and resolve two closely spaced objects. Defined by: NA = n*sinθ [where n is the refractive index of light and θ is the half-angle of the light cone formed between the object and the lens]
  4. Excitation and Emission (with respect to fluorescence microscopy): The wavelength of light absorbed or emitted by the major fluorophore, respectively.
  5. Quantum yield: Ratio of number of photons absorbed and number of photons emitted by a fluorophore
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What is the magnification necessary to see pond life

My daughter is 5 and wants to learn about Biology. I thought a great start is to see life from pond water through a USB microscope. It would be great if she could see organisms like amoebas, flagellates and ciliates with her own eyes. The…
MyDaftQuestions
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Online repositories of scanning electron microscope photographs?

I have looked at every single Wikimedia commons photo in the category 'scanning electron microscope'. Unfortunately, I could not find any other repositories of such photos, but I would readily look at every single photograph there as well. It…
magnetar
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What to look for when buying a light microscope?

I am a science lover and want to buy a microscope to explore things around me. Like studying cell structures, microorganisms, blood and plants. It would be great if there is way to photograph slides. Just curious to know and explore things around…
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Microscope recommendation for an amateur?

I am a mathematics student looking for a hobby and this has come up as a potential hobby. Thus I am interested in buying a high-magnification microscope that is within the limits of my budget. My first question is, is high-magnification always…
Don Larynx
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To which thing does "two-thirds" refer here?

Life and Letters of Charles Darwin, volume 2 includes the following letter from Darwin to Hooker, about a examining a plant that absorbs ammonia:- Reflect how little ammonia a plant can get growing on poor soil—yet it is nourished. The really…
Ahmed Samir
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Super-resolution imaging in vivo

Are there any microscopy modalities or techniques for in vivo imaging at higher resolutions than the diffraction limit? I was looking at this list: Super resolution microscopy, but they don't talk about in vivo imaging.
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Is it true that viruses cannot be seen with phase-contrast microscopy?

There appears to be a lot of material on the internet claiming that viruses can be only seen with electron microscopes, and not with light microscopes. To the contrary, for example this old paper published in Nature states that viruses can be seen…
est
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Does cheese contain cells of animal stomachs?

When cheese is made with calf rennet, is it possible that the cheese contains cells of this calf (stomach)? Dried and cleaned stomachs of young calves are sliced into small pieces and then put into salt water or whey, together with some vinegar or…
Marijn
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Can I just simply exchange the eyepiece in a microscope?

I hope it's the right place to ask about microscopy. So my question is what parameters do I have to take into account when buying a new eyepiece for my microscope? Currently I own an Aomekie XSP-42 with a WF16X eyepiece and I would like to upgrade…
fazekaszs
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Atomic force microscopy: depth penetration?

What depth penetration can one typically get with atomic force microscopes? (i.e. how far into the tissue can one image?). I have found numbers on acquisition times (minutes) and spatial resolutions (~nm), but what about depth? Also, what is the…
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Cannot see images beyond a certain magnification with a microscope

Using a new microscope with my son, we cannot see images beyond a certain magnification: Eyepiece: 25x - Objective lens: 4x --> OK Eyepiece: 25x - Objective lens: 10x --> OK Eyepiece: 25x - Objective lens: 40x --> not focused Eyepiece: 25x…
Pietro
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What is the best way to clean immersion oil from the microscope lens?

My job is to photograph mushroom spores at x100 using immersion oil. What is the best practice for cleaning the oil from the lens? Right now I am just wiping it with a cotton swab.
bgmCoder
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How to operate a microtome?

In the picture above (Source: Amazon.com, United Scientific MCT001 Hand Microtome) we can see a microtome. How is it operated?
micro
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Lateral, axional and temporal resolutions for imaging in vivo

What are the spatial (lateral and axional), and temporal resolutions that one is expected to get with the following optical imaging techniques? Optical Bioluminiscence Imaging (BLI) Optical Fluorescence Imaging (FLI) Multiphoton Microscopy (e.g.…
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Woodland outdoor microscopy advice

Let me start by saying I have never used a microscope outdoors, and in general I have never owned a microscope nor used one regularly. However, I am currently developing and organising some activities for children, to be carried out in a woodland.…
usumdelphini
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